Skip to content
#

synteny

Here are 34 public repositories matching this topic...

Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, dire…

  • Updated Jul 12, 2020
  • HTML

CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on co-linearity between them. OrthNets enable detection of all orthologous gene groups that share the same evolutionary history, using a search based on network topology

  • Updated Jun 9, 2022
  • Python

Improve this page

Add a description, image, and links to the synteny topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the synteny topic, visit your repo's landing page and select "manage topics."

Learn more